rs6492885 chr15:39420717 T>C

Sequence
acagtggatgcaggccagtgggtg[T/C]gtgcactgtgtgcgagccgaagca
ASB in cell types
ESO-26 (Gastroesophageal junction adenocarcinoma) primary human epidermal keratinocytes
ASB for transcription factors
KLF5_HUMAN BRD4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
KLF5_HUMAN 3.55 n/a 7.6·10-51.00 1.33 n/a No Hit
BRD4_HUMAN 2.27 -2.27 0.021.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Esophagus_Mucosa Prostate Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg

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