rs6495017 chr15:72797284 T>A
- Sequence
cgcctccgggcagccttcccggac[T/A]accccaggacttgggggcgtggct
- ASB in cell types
- HEK293 (embryonic kidney) GM12890 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- TTP_HUMAN ZN335_HUMAN ZN436_HUMAN RBM25_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TTP_HUMAN | 1.64 | n/a | 2.00 | n/a | n/a | |||
| ZN335_HUMAN | -1.18 | 1.18 | 1.00 | n/a | No Hit | |||
| ZN436_HUMAN | 2.82 | n/a | 1.00 | 0.59 | Weak Discordant | |||
| RBM25_HUMAN | 0.99 | n/a | 4.00 | n/a | n/a | |||
| ZFX_HUMAN | -0.68 | 1.57 | 1.00 | n/a | No Hit |
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Motif analysis
