rs6495063 chr15:73390367 G>T
- Sequence
tgtgagttagcatgttgctgaggg[G/T]caaagtcctaagagaaagagggca
- ASB in cell types
- YCC3 (gastric adenocarcinoma) BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- HNF4A_HUMAN GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HNF4A_HUMAN | n/a | 3.40 | 4.00 | 0.11 | Weak Concordant | |||
| GCR_HUMAN | -2.34 | 2.45 | 1.00 | n/a | No Hit |
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Motif analysis
