rs6495075 chr15:73688664 A>G

Sequence
gtgtgggcccttggccagccggcc[A/G]ccactctgggtccagatttccatc
ASB for transcription factors
TCF21_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TCF21_HUMAN 1.77 -1.51 0.041.00 3.00 n/a n/a
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP cd276 gene expression in liver,  gamma-glutamyl transferase (ggt),  refractive error,  sporadic creutzfeldt-jakob disease,  tetrology of fallot
GTEx eQTL Brain_Caudate_basal_ganglia,  Brain_Cortex,  Colon_Transverse,  Heart_Atrial_Appendage,  Heart_Left_Ventricle,  Liver

Download