rs6495622 chr15:34210266 G>A
- Sequence
gtgatactgcgataggaactgagg[G/A]tgggtaaaggtcaacgaatgaccg
- ASB in cell types
- pancreas K562 (myelogenous leukemia)
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| pancreas | 0.69 | -0.06 | 1.00 | |||
| K562 (myelogenous leukemia) | 0.23 | 0.62 | 1.99 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Minor_Salivary_Gland, Nerve_Tibial, Spleen, Testis, Thyroid, Whole_Blood