rs6498114 chr16:10870261 G>T

Sequence
taccgtaaatctaccccaaatagg[G/T]tggcagtcttcaaactgaaaccag
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
SRF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SRF_HUMAN 2.84 -2.58 9.4·10-41.00 1.00 -3.36 Concordant
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Motif analysis

SRF_HUMAN Concordant
SRF_HUMAN pic

Genetic associations

EMBL-EBI celiac disease nasopharyngeal carcinoma
GRASP celiac disease fasting insulin homa-b homa-ir waist hip ratio
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Cells_Cultured_fibroblasts Muscle_Skeletal Spleen

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