rs6501638 chr17:73427252 T>C

Sequence
aaattgaattataaatacagagga[T/C]agaagaacaggttaacaacactgt
ASB in cell types
VCaP (prostate carcinoma)
ASB for transcription factors
MBL2_HUMAN SUMO2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MBL2_HUMAN 2.09 -0.41 2.2·10-61.00 1.50 n/a n/a
SUMO2_HUMAN 2.14 -0.93 8.5·10-61.00 1.50 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP body mass index (bmi),  hdl cholesterol,  total cholesterol change with statins,  variant creutzfeldt-jakob disease

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