rs6502039 chr17:83054207 G>A
- Sequence
gcccggacagaaggcactgacact[G/A]taccctggagagagacaggaagga
- ASB in cell types
- MDM(monocyte derived macrophages) macrophages form periferal blood monocyte-derived macrophages from peripheral blood
- ASB for transcription factors
- SPI1_HUMAN MTG8_HUMAN TF65_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 1.51 | 0.73 | 1.33 | n/a | No Hit | |||
| MTG8_HUMAN | -1.86 | 2.66 | 2.00 | n/a | n/a | |||
| TF65_HUMAN | 2.34 | n/a | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Aorta, Artery_Tibial, Brain_Cerebellum, Brain_Nucleus_accumbens_basal_ganglia, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Heart_Left_Ventricle, Prostate, Testis, Thyroid, Whole_Blood