rs6502555 chr17:2826358 T>C
- Sequence
aggctgcgggtgggtggggaagtg[T/C]gtagagctgtttgagaagcggtga
- ASB in cell types
- GM12891 (male B- cells lymphoblastoid cell line) HCT-116 (colon carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.93 | 0.35 | 1.32 | n/a | No Hit |
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