rs6502671 chr17:3002804 C>T
- Sequence
accttgttccttccctctctgggc[C/T]tctagttttgtctgtgtgaaatga
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) naive IgD+ B cells primary B-CLL cells 22RV1 (prostate carcinoma)
- ASB for transcription factors
- IKZF2_HUMAN FOXP1_HUMAN IKZF1_HUMAN BRD4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF2_HUMAN | 1.42 | -1.14 | 1.00 | n/a | n/a | |||
| FOXP1_HUMAN | 3.21 | -1.61 | 1.75 | n/a | No Hit | |||
| IKZF1_HUMAN | 1.43 | -1.56 | 1.25 | n/a | No Hit | |||
| BRD4_HUMAN | 2.99 | 0.07 | 1.38 | n/a | n/a | |||
| ANDR_HUMAN | 2.28 | n/a | 2.00 | n/a | No Hit |
Items per page:
1 – 5 of 7