rs6504061 chr17:61657064 C>T

Sequence
tcaagagcagacatccttatcttg[C/T]tcctaagggggaaagcattcagtt
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
NFRKB_HUMAN HES1_HUMAN CSN2_HUMAN ZN217_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
NFRKB_HUMAN n/a 3.81 1.001.1·10-3 6.00 n/a n/a
HES1_HUMAN n/a 3.45 1.004.0·10-3 6.00 n/a n/a
CSN2_HUMAN n/a 3.55 1.006.8·10-3 6.00 n/a n/a
ZN217_HUMAN n/a 2.74 1.007.5·10-3 6.00 n/a n/a
HCFC1_HUMAN n/a 3.10 1.000.01 6.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP parkinsons disease
GTEx eQTL Brain_Frontal_Cortex_BA9 Nerve_Tibial

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