rs6504238 chr17:64506523 G>C
- Sequence
ctctcttgacctcaccttcttctg[G/C]tctttccacacctcaagcaagcca
- ASB in cell types
- primary B-CLL cells 22RV1 (prostate carcinoma)
- ASB for transcription factors
- BRD4_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BRD4_HUMAN | 2.35 | 0.67 | 1.75 | n/a | n/a | |||
| ANDR_HUMAN | 2.73 | -0.91 | 2.17 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP adiponectin levels, diastolic blood pressure (dbp), systolic blood pressure (sbp), total cholesterol change with statins
GTEx eQTL Adipose_Visceral_Omentum, Breast_Mammary_Tissue, Esophagus_Muscularis, Heart_Atrial_Appendage, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood