rs6504249 chr17:64680031 A>G
- Sequence
gccagaatgagatcaacatgactc[A/G]taagcctgtgggtcaatgtcaaac
- ASB in cell types
- neural progenitors Ishikawa (endometrial adenocarcinoma) HAEC (human aortic endothelial cells) MCF10A (breast epithelial cells)
- ASB for transcription factors
- JUN_HUMAN TEAD4_HUMAN FOSL2_HUMAN ZN366_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | 3.17 | -0.82 | 2.00 | -5.27 | Concordant | |||
| TEAD4_HUMAN | 1.90 | 0.20 | 1.70 | n/a | No Hit | |||
| FOSL2_HUMAN | 1.99 | -1.83 | 1.50 | -5.54 | Concordant | |||
| ZN366_HUMAN | 2.46 | -2.18 | 1.00 | n/a | n/a |
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Motif analysis
