rs6504448 chr17:48636709 G>C

Sequence
gcgtcccgcgccgggtgaaggggc[G/C]tgttcctgcaggcgctcggggctc
ASB in cell types
GM19240 (B cells Lymphoblastoid Cell Lines) GM19239 (male B-cells lymphoblastoid cell line)
ASB for transcription factors
CTCF_HUMAN STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.43 0.15 4.8·10-141.00 1.19 n/a No Hit
STAG1_HUMAN 2.24 0.94 0.021.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

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