rs6505236 chr17:31383672 A>G
- Sequence
tggtgcgatgagttcttcctgcag[A/G]tggcctcatctctctgtattacca
- ASB in cell types
- foreskin keratinocyte PANC1 (pancreatic ductal adenocarcinoma) GM12891 (male B- cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -1.86 | 2.54 | 1.69 | 0.42 | Weak Concordant |
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Motif analysis
