rs6506712 chr18:9870031 C>G
- Sequence
ttgaccctaccgtttgggcagctt[C/G]atttatcttttctgtgtccctgac
- ASB in cell types
- K562 (myelogenous leukemia) HepG2 (hepatoblastoma) MOLM14 (Adult acute myeloid leukemia) MV-4-11 (Childhood acute monocytic leukemia)
- ASB for transcription factors
- PKNX1_HUMAN KDM1A_HUMAN CDK9_HUMAN CDK8_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PKNX1_HUMAN | n/a | 2.09 | 1.25 | n/a | No Hit | |||
| KDM1A_HUMAN | 0.47 | 1.40 | 1.50 | n/a | n/a | |||
| CDK9_HUMAN | -3.07 | 3.12 | 1.00 | n/a | n/a | |||
| CDK8_HUMAN | 1.22 | 2.02 | 1.33 | n/a | n/a | |||
| SMCA4_HUMAN | -0.54 | 1.60 | 1.00 | n/a | n/a |
Items per page:
1 – 5 of 15