rs6506713 chr18:9870049 C>G
- Sequence
cagcttcatttatcttttctgtgt[C/G]cctgaccttgatgttgaaaccatt
- ASB in cell types
- HepG2 (hepatoblastoma) K562 (myelogenous leukemia) MV-4-11 (Childhood acute monocytic leukemia) MOLM14 (Adult acute myeloid leukemia)
- ASB for transcription factors
- PKNX1_HUMAN KDM1A_HUMAN SMCA4_HUMAN CDK9_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PKNX1_HUMAN | -0.82 | 1.96 | 1.25 | n/a | No Hit | |||
| KDM1A_HUMAN | 0.36 | 1.21 | 1.50 | n/a | n/a | |||
| SMCA4_HUMAN | -0.37 | 1.37 | 1.25 | n/a | n/a | |||
| CDK9_HUMAN | -2.61 | 2.85 | 1.00 | n/a | n/a | |||
| NCOR1_HUMAN | 1.70 | 1.03 | 1.00 | n/a | n/a |
Items per page:
1 – 5 of 15