rs6509542 chr19:29662928 T>C

Sequence
ttggagcgccattcagatccatag[T/C]tggaaggaaggacagaagaggaga
ASB in cell types
HEK293 (embryonic kidney) HCASMC (Human coronary artery smooth muscle cells)
ASB for transcription factors
TCF21_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TCF21_HUMAN n/a 1.64 1.005.3·10-5 2.00 n/a n/a
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration age at death with kuru exposure alzheimers disease amyotrophic lateral sclerosis (als) age of onset parkinsons disease refractive error
GTEx eQTL Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg

Download