rs6509955 chr19:55703818 G>A

Sequence
atggatttaagtttaagcacctgc[G/A]tgtgagcggctaccgcgtgggctg
ASB in cell types
GM17942 (lymphoblastoid cell)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM17942 (lymphoblastoid cell) 2.33 -3.88 4.8·10-41.00 1.50
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP alzheimers disease,  fasting blood glucose,  infant head circumference,  salmonella-induced pyroptosis
GTEx eQTL Adipose_Subcutaneous,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Thyroid

Download