rs6510713 chr19:2865512 G>A
- Sequence
cctcccttcccaggcattgtgaag[G/A]ccctgtttccctagttgtgcagct
- ASB in cell types
- K562 (myelogenous leukemia) CD34+ bone marrow cell-derived erythroid progenitors MOLT-4 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- ARI1B_HUMAN MYBB_HUMAN NCOR1_HUMAN ATF3_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ARI1B_HUMAN | 2.56 | n/a | 2.00 | n/a | n/a | |||
| MYBB_HUMAN | 2.89 | n/a | 2.00 | n/a | n/a | |||
| NCOR1_HUMAN | 2.13 | -5.29 | 2.67 | n/a | n/a | |||
| ATF3_HUMAN | 2.79 | n/a | 2.00 | n/a | No Hit | |||
| MTG16_HUMAN | 1.40 | n/a | 4.00 | n/a | n/a |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Cortex, Brain_Putamen_basal_ganglia, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Nerve_Tibial, Ovary, Pancreas, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Stomach, Testis, Uterus