rs6512479 chr20:47809916 C>T
- Sequence
gtgggctgaagcctgcctccctcc[C/T]taaggggcttggcttaaggccgca
- ASB in cell types
- HMLE-Twist-ER (breast cancer)
- ASB for transcription factors
- SMAD3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMAD3_HUMAN | -2.24 | 2.67 | 1.00 | 3.83 | Concordant |
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Motif analysis
