rs6515535 chr20:24843326 A>G

Sequence
ccgagtcattctgctcactgtaag[A/G]tatttcctgaaggcacattacttg
ASB in cell types
MDM(monocyte derived macrophages) macrophages form periferal blood
ASB for transcription factors
SPI1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN 1.50 2.64 0.076.2·10-8 1.50 n/a No Hit
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP body mass index (bmi),  obesity with early age of onset (age >2),  sporadic creutzfeldt-jakob disease,  years of education
GTEx eQTL Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Lung,  Nerve_Tibial,  Prostate,  Testis,  Whole_Blood

Download