rs6519382 chr22:22587231 T>C

Sequence
tgtaatcccagcactttgggagac[T/C]gaggagggtggatcataaggtcag
ASB in cell types
neural cell H929 (plasma cell myeloma) LUHMES (lund human mesencephalic cells)
ASB for transcription factors
RAD21_HUMAN SMC3_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RAD21_HUMAN 2.74 n/a 8.7·10-51.00 2.00 n/a n/a
SMC3_HUMAN 2.25 -4.71 0.041.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Testis Thyroid

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