rs6519520 chr22:24595928 A>G
- Sequence
taatgttacctcagcaagtagctg[A/G]gtggcactgagcctcctggtagcc
- ASB in cell types
- CWR22 (prostate carcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| CWR22 (prostate carcinoma) | -0.55 | 2.08 | 2.00 |
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Motif analysis
No data available
Genetic associations
GRASP bipolar disorder, hypertension (early onset hypertension), serum gamma-glutamyl transferase (ggt) activity (in adolescents), serum gamma-glutamyl transferase (ggt) activity (in adults)
GTEx eQTL Colon_Transverse, Esophagus_Mucosa, Lung, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Small_Intestine_Terminal_Ileum, Stomach, Testis, Thyroid, Whole_Blood