rs6526342 chrX:23781621 A>C

Sequence
gtctaaaatgtcaggacttaggag[A/C]gcttgttatacatttcctggtaac
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF1_HUMAN ELF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN -1.86 3.06 1.002.1·10-4 2.50 n/a No Hit
ELF1_HUMAN n/a 3.17 1.004.7·10-3 2.00 n/a No Hit
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Tibial

Download