rs6531219 chr2:20180095 G>C

Sequence
cagcccatgcagactccagcccct[G/C]ttgccagccatccattgctgggat
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
P53_HUMAN EPAS1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
P53_HUMAN -1.24 2.42 0.990.04 1.00 n/a No Hit
EPAS1_HUMAN 0.45 1.60 1.000.04 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Cells_Cultured_fibroblasts Skin_Sun_Exposed_Lower_leg

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