ADASTRA v5.1.3
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rs6531867
chr4:75698235
G
>
C
Sequence
aaggagacaagagtgttaatgtta[G/C]agagaaggctatgtgaggaaggaa
ASB in cell types
GM02255 (Lymphoblastoid Cell Lines)
GM19239 (male B-cells lymphoblastoid cell line)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM02255 (Lymphoblastoid Cell Lines)
-0.14
2.65
1.00
3.5·10
-3
1.00
GM19239 (male B-cells lymphoblastoid cell line)
2.17
-2.16
0.02
1.00
1.00
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
ldl cholesterol
,
total cholesterol
,
triglycerides change with statins
GTEx eQTL
Artery_Aorta
,
Heart_Atrial_Appendage
,
Lung
,
Pancreas
,
Skin_Sun_Exposed_Lower_leg
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale