rs6533945 chr4:115938967 G>A
- Sequence
tatatcctgaaattattgtgcaag[G/A]tcagcaattattcattatcctatc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) K562 (myelogenous leukemia)
- ASB for transcription factors
- MAFK_HUMAN EMSY_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MAFK_HUMAN | 2.73 | -0.38 | 1.75 | -2.00 | Weak Concordant | |||
| EMSY_HUMAN | 2.88 | -5.39 | 2.00 | n/a | n/a |
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Motif analysis
