rs6534108 chr4:118864894 G>A

Sequence
ttacaataatatcctgttgaataa[G/A]taagatactgatagctacattata
ASB in cell types
MS-1 (Small cell lung carcinoma) epithelial cell of prostate
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN -0.06 2.05 1.009.0·10-3 1.22 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy) diastolic blood pressure (dbp) fasting insulin triglycerides
GTEx eQTL Brain_Nucleus_accumbens_basal_ganglia Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Thyroid

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