rs6537754 chr1:112736029 T>C
- Sequence
gtggaaaatgccaggtggaagcct[T/C]tagaatggcctgtacctatcaaaa
- ASB in cell types
- NRCC Detroit 562 (Pharyngeal squamous cell carcinoma) HCASMC (Human coronary artery smooth muscle cells) HCT-116 (colon carcinoma)
- ASB for transcription factors
- TF65_HUMAN TCF21_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TF65_HUMAN | 1.81 | 0.84 | 1.08 | n/a | No Hit | |||
| TCF21_HUMAN | 0.91 | n/a | 6.00 | n/a | n/a |
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