rs6538434 chr12:93564415 T>G
- Sequence
tctctcactagaactagacctctt[T/G]aagaggaaggctgagtccccctag
- ASB in cell types
- GM19238 (female B-cells lymphoblastoid cell lines) GM17942 (lymphoblastoid cell) GM18486 (Lymphoblastoid Cell Lines) ID00014 (lymphoblastoid cell, DiGeorge syndrome)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN RAD21_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.21 | 0.28 | 1.42 | n/a | No Hit | |||
| STAG1_HUMAN | 1.02 | -0.10 | 1.07 | n/a | n/a | |||
| RAD21_HUMAN | 1.64 | -0.10 | 1.62 | n/a | n/a |
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