rs6538618 chr12:95217409 T>C

Sequence
ccacacaaaggacgcggccgactc[T/C]agcgaccctgcggcgctcccgggc
ASB in cell types
K562 (myelogenous leukemia) foreskin keratinocyte MOLT-4 (Adult T acute lymphoblastic leukemia) HEK293T (embryonic kidney)
ASB for transcription factors
INT11_HUMAN RBM25_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
INT11_HUMAN 1.25 -0.57 0.031.00 2.00 n/a n/a
RBM25_HUMAN 1.46 -0.15 0.040.94 1.50 n/a n/a
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Tibial Cells_Cultured_fibroblasts Muscle_Skeletal Whole_Blood

Download