rs6538820 chr12:78288513 A>G

Sequence
ttcgatggaaattttctggtgtta[A/G]gaaccattattatccctgtgtatc
ASB in cell types
LNCaP (prostate carcinoma)
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
LNCaP (prostate carcinoma) 2.16 -1.13 1.6·10-31.00 1.00
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd,  college completion,  fasting blood glucose,  hypertension (early onset hypertension),  total cholesterol,  years of education
GTEx eQTL Cells_Cultured_fibroblasts

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