rs6539046 chr12:102694376 C>T
- Sequence
ccttaaataaccagcatccataac[C/T]gggtaaacaatccaaaacactgtg
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | -0.27 | 1.40 | 1.36 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP birth weight, college completion, fasting blood glucose, obesity with early age of onset (age >2), waist hip ratio