rs6540043 chr16:85539804 G>T
- Sequence
ggctgccctgtcccctccctgaag[G/T]ccttagtccagtgtgttcatttag
- ASB in cell types
- liver
- ASB for transcription factors
- HNF4A_HUMAN RXRA_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HNF4A_HUMAN | -3.96 | 2.46 | 1.50 | n/a | No Hit | |||
| RXRA_HUMAN | -1.80 | 1.94 | 1.50 | 0.19 | Weak Concordant |
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Motif analysis
