rs6540077 chr16:87779258 C>G
- Sequence
gtctgcgtcggccgccaggggtca[C/G]tcctcccgcgcagaaggcggcctt
- ASB in cell types
- HeLa Kyoto (cervical adenocarcinoma) WA09 (embryonic stem cells) WA09 derived cardiac progenitor cells HeLa (cervical adenocarcinoma)
- ASB for transcription factors
- SMC3_HUMAN TYY1_HUMAN PMEPA_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMC3_HUMAN | -0.05 | 1.69 | 1.96 | n/a | n/a | |||
| TYY1_HUMAN | 2.59 | -0.30 | 1.67 | n/a | No Hit | |||
| PMEPA_HUMAN | n/a | 2.35 | 2.00 | n/a | n/a |
Items per page:
1 – 3 of 3