rs6540436 chr1:207649422 G>A
- Sequence
tcaccatcgtaaactcagactttg[G/A]tattattccctgtccttttagggc
- ASB in cell types
- iPS-derived chondrocytes
- ASB for transcription factors
- SCRT2_HUMAN RARA_HUMAN SCRT1_HUMAN SP7_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SCRT2_HUMAN | 2.21 | n/a | 2.00 | n/a | n/a | |||
| RARA_HUMAN | 1.44 | 0.63 | 1.00 | n/a | No Hit | |||
| SCRT1_HUMAN | 2.57 | n/a | 2.00 | n/a | n/a | |||
| SP7_HUMAN | 2.73 | n/a | 2.00 | n/a | n/a |
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