rs6540507 chr1:209096282 A>G
- Sequence
gtgcgtttccaaaatacttaagcc[A/G]tgactcagagacccactcagactg
- ASB in cell types
- A549 (lung carcinoma)
- ASB for transcription factors
- GCR_HUMAN EP300_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 2.33 | -0.85 | 2.00 | n/a | No Hit | |||
| EP300_HUMAN | 1.92 | -0.24 | 1.75 | n/a | n/a |
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