rs6540743 chr1:212497827 A>G

Sequence
ctgcagtcagggggaactattagc[A/G]taagctgatagttccaggcagccg
ASB in cell types
HepG2 (hepatoblastoma)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HepG2 (hepatoblastoma) 1.64 0.45 0.011.00 1.18
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Motif analysis

No data available

Genetic associations

GRASP college completion,  mitral annular calcium,  obesity with early age of onset (age >2)
GTEx eQTL Esophagus_Mucosa,  Testis,  Thyroid,  Whole_Blood

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