rs6540973 chr1:9626366 A>G
- Sequence
agagaggggataagctttcgctga[A/G]gcagaaaggaagagtgagccaggg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) germinal center B-cells
- ASB for transcription factors
- CBP_HUMAN STAG1_HUMAN ATF7_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CBP_HUMAN | -0.14 | 3.37 | 2.00 | n/a | n/a | |||
| STAG1_HUMAN | 1.32 | 0.63 | 1.00 | n/a | n/a | |||
| ATF7_HUMAN | 2.69 | -2.43 | 1.00 | n/a | n/a |
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