rs6541234 chr1:218828321 T>C
- Sequence
ccacttacagagtctacagtgttg[T/C]cttagccagtgcaagatgtactca
- ASB in cell types
- 22RV1 (prostate carcinoma) prostate cancer
- ASB for transcription factors
- ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.40 | -0.10 | 2.12 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP height, hip bone mineral density (bmd), irritible bowel syndrome, major depressive disorder, sporadic creutzfeldt-jakob disease, transmission distortion