rs6542081 chr2:112707012 A>G

Sequence
ttcgagaccagcttggccaacatg[A/G]tgaaaccccgtttctactaaaaat
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
ATF4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ATF4_HUMAN 3.34 n/a 4.7·10-41.00 2.00 -3.84 Concordant
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Motif analysis

ATF4_HUMAN Concordant
ATF4_HUMAN pic

Genetic associations

GTEx eQTL Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Stomach Testis Whole_Blood

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