rs6542925 chr2:100281619 T>C

Sequence
tgaatggaaaaatacagaacagca[T/C]gtattgttcctcaagaagaaaaat
ASB in cell types
HASM2 (Human airway smooth muscle 2)
ASB for transcription factors
GCR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GCR_HUMAN -0.05 1.38 1.009.0·10-3 1.00 -3.73 Discordant
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Motif analysis

GCR_HUMAN Discordant
GCR_HUMAN pic

Genetic associations

GRASP comorbid depressive syndrome and alcohol dependence hdl cholesterol change with statins height obesity with early age of onset (age >2) waist hip ratio
GTEx eQTL Artery_Aorta Breast_Mammary_Tissue Esophagus_Muscularis Heart_Atrial_Appendage Muscle_Skeletal Pancreas

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