ADASTRA v5.1.3
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rs6544640
chr2:43289007
G
>
A
Sequence
ctaatctactttctgtctctatca[G/A]tttgccaattctggacatttcctt
ASB in cell types
CD14+ monocytes
MDM(monocyte derived macrophages)
ASB for transcription factors
STAT1_HUMAN
SPI1_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN
2.01
-0.37
0.02
1.00
3.00
n/a
No Hit
SPI1_HUMAN
0.96
-0.04
0.03
1.00
1.60
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
hdl cholesterol
,
hdl cholesterol change with statins
,
total cholesterol
GTEx eQTL
Esophagus_Gastroesophageal_Junction
,
Nerve_Tibial
,
Skin_Sun_Exposed_Lower_leg
,
Thyroid
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)