rs6544679 chr2:43637387 A>G
- Sequence
gctgctgagatagacaggtgagaa[A/G]gcccggggacgaggggccactcca
- ASB in cell types
- K562 (myelogenous leukemia) HepG2 (hepatoblastoma) MS-1 (Small cell lung carcinoma)
- ASB for transcription factors
- RBM25_HUMAN TYY1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RBM25_HUMAN | -0.53 | 3.69 | 2.00 | n/a | n/a | |||
| TYY1_HUMAN | -0.55 | 1.95 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Brain_Spinal_cord_cervical_c-1, Colon_Transverse, Esophagus_Muscularis, Testis, Whole_Blood