rs6544859 chr2:23453237 A>G

Sequence
gcaaacactccctggccccaccat[A/G]aacagctggttgatgtaaccacac
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
SRF_HUMAN ZN687_HUMAN SKIL_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SRF_HUMAN 3.54 -3.68 5.5·10-61.00 1.00 n/a No Hit
ZN687_HUMAN 2.62 -2.34 0.011.00 1.00 n/a n/a
SKIL_HUMAN 2.41 -2.01 0.051.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP cystatin c in serum diastolic blood pressure (dbp) systolic blood pressure (sbp) waist hip ratio
GTEx eQTL Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg

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