rs6545468 chr2:55050505 C>G
- Sequence
gatgcgccacccgccctgtcccca[C/G]ttgccgccgccgcccagatgagct
- ASB in cell types
- CD14+ monocytes PANC1 (pancreatic ductal adenocarcinoma) MCF7 (Invasive ductal breast carcinoma) MDA-MB-231 (breast adenocarcinoma)
- ASB for transcription factors
- STAT1_HUMAN HNF1B_HUMAN GATA3_HUMAN BC11B_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 1.51 | n/a | 2.50 | n/a | No Hit | |||
| HNF1B_HUMAN | 3.07 | -5.41 | 2.00 | n/a | No Hit | |||
| GATA3_HUMAN | 2.80 | -0.38 | 1.33 | n/a | No Hit | |||
| BC11B_HUMAN | 1.66 | -0.33 | 2.00 | n/a | n/a |
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