rs6546403 chr2:68405130 C>T
- Sequence
ctccctcccctaaccaagggaagc[C/T]gtgagagactgtgccgtgagggac
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- IKZF1_HUMAN MEF2B_HUMAN NFAC3_HUMAN IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 3.27 | -3.61 | 1.00 | n/a | No Hit | |||
| MEF2B_HUMAN | 2.74 | -2.62 | 1.00 | n/a | No Hit | |||
| NFAC3_HUMAN | 2.65 | n/a | 1.00 | n/a | No Hit | |||
| IKZF2_HUMAN | 2.30 | -4.25 | 1.50 | n/a | n/a |
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