rs6546629 chr2:70782461 G>C

Sequence
aaactctccttccagactgaagga[G/C]ccatggcaactaaatgtaattcat
ASB in cell types
A549 (lung carcinoma)
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
A549 (lung carcinoma) 2.06 -2.03 0.031.00 1.00
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy),  alzheimers disease with psychotic symptoms (alzheimers disease with psychotic symptoms v. alzheimers disease without psychotic symptoms)
GTEx eQTL Nerve_Tibial,  Pancreas,  Testis,  Whole_Blood

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