rs6546781 chr2:72696762 C>A

Sequence
gaacatgagtgattcctggggagg[C/A]cagaagacaaattccctagctgtg
ASB for transcription factors
RARA_HUMAN
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RARA_HUMAN -1.90 2.07 1.000.04 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP aortic valve calcium,  diastolic blood pressure (dbp),  major depressive disorder (narrow definition),  major depressive disorder (narrow definition) (males),  parkinsons disease,  total cholesterol,  triglycerides change with statins
GTEx eQTL Pituitary,  Whole_Blood

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